Stanford hiv genotype database
Webb12 okt. 2024 · hiv薬剤耐性検査は、抗hiv療法の選択および再選択の目的で行った場合に、3か月に1回 を限度として6,000点を算定できる（2006年4月1日保険適用）。依頼は病院情報システムか ら行う。 (1) 依頼方法 依頼画面は[6．感染]→[hiv確認検査]→[薬剤耐性検査] Webb29 jan. 2024 · RECall, MEGA X and the Stanford HIV database) against the standard method (RECall and Stanford database). Exatype is a web-based HIV Drug resistance bioinformatic pipeline available at sanger.exatype.com . To validate the exatype, we used a test set of 135 remnant HIV viral load samples at the National HIV Reference Laboratory …
Stanford hiv genotype database
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WebbThe Stanford HIV Drug Resistance Database hosts a freely available online genotypic resistance interpretation system called HIVdb to help clinicians and laboratories … WebbBased on the PR/RT sequences, HIV-1 subtypes were classified as 95 (99%) HIV-1 subtype C (HIV-1C) while one sample as 02_AG. Integrase sequencing was successful for 89 sequences, and all the ...
Webb26 dec. 2006 · We therefore interrogated the Stanford HIV Drug Resistance Database , where the updated results from this international collaboration maintain detailed RT mutation data for subtype G isolates. The output has detailed information on GenBank accession numbers and publication data, from which we deduced the country of sampling. WebbThe program is linked to the Stanford HIV drug resistance database and can additionally perform viral genotyping and algorithmic estimation of resistance to specific antiretroviral drugs. AVAILABILITY: http://cpr.stanford.edu/cpr/index.html. Additional Information
Webb17 juni 2024 · Based on the Stanford Genotypic Resistance Interpretation Algorithm major or non-accessory NRTI drug resistance was observed in 6 (3.8%) sequences, PI or NNRTI resistance in one (0.6%) case each ... Webb17 sep. 2024 · HIV drug resistance database. Stanford University. ... Paredes R, Tzou PL, van Zyl G, et al. Collaborative update of a rule-based expert system for HIV-1 genotypic resistance test interpretation. PLoS One 2024; 12:e0181357. Wensing AM, Calvez V, Günthard HF, et al. 2024 Update of the Drug Resistance Mutations in HIV-1.
Webb21 dec. 2024 · HIV pol regions consisted of whole protease and partial reverse transcriptase were genotyped and analyzed for DRMs. Lag-Avidity testing was performed to identify the infection stages. Of the 356 HIV-1 WB positive samples tested by Lag-avidity assay, 19.1% (68/356) were recent infections.
Webb18 maj 2024 · The Stanford HIV database maintains a prediction server for annotating HIV-1 sequences with known resistance mutations . ... The high-quality interactions from the Stanford HIV Genotype-Phenotype database were downloaded on 12/21/2024 and contained 1959 lines at the time of download. dewitt clinton consistoryWebb1 dec. 2024 · It currently comprises: (1) ∼450 000 sequences (reverse transcriptase, protease or integrase) from ∼200 000 patients with treatment status, from all around the word; (2) ∼60 000 results of drug susceptibility assays from HIV-1 virus isolates; (3) clinical outcome data from 15 clinical trials; (4) many software programs and web services to … dewitt clinton elementary school yearbooksWebbStanford HIV Drug Resistance Database. HIV drug resistance and genotypic resistance interpretation. Clinical Care Options for HIV. News, conference coverage, and slide sets. … church revival imagesWebbA curated database containing nearly all published HIV RT and protease sequences: a resource designed for researchers studying evolutionary and drug-related variation in the … dewitt clinton elementary school lockport nyWebb7 juni 2016 · Our objective was to describe viral suppression and antiretroviral (ARV) resistance mutations in an ongoing cohort of perinatally-infected HIV+ (PHIV+) pregnant women. Descriptive analysis was performed using SPSS 18.0. From 2011 to 2014, we followed 22 PHIV+ pregnant women. Median age at prenatal entry was 19 years … dewitt clinton basketballWebb29 juni 2009 · Plasma samples from 22 different HIV-infected antiretroviral-experienced subjects who had HIV genotype testing done for virologic failure indication ... All amino acid positions associated with antiretroviral resistance according to IAS-USA 2008 and Stanford HIV drug resistance database were evaluated . church revival programWebb20 mars 2009 · Genotypic estimation of resistance is performed using the Stanford SIERRA web service. 3 DISCUSSION. The CPR tool aims to promote consistency between epidemiological studies by providing investigators worldwide with ready access to a simple, standard protocol for genotypic estimation of transmitted HIVDR. dewitt clinton elementary school lunch menu